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You are using remap on a global scope. Try:
<launch>
<node name="publiser" pkg="hwu_meta_data" type="publisher_node.py" />
<node ns="subnamespace3" name="remapped_ns_subcriber"
pkg="hwu_meta_data" type="subscriber_node.py" output="screen">
<remap from="your_topic" to="/your_topic" />
</node>
</launch>
This requires to explicitly remap each topic you use but in my opinion that's much cleaner anyway.