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Hello, I have gotten the same problem with git.
The steps I recommend you is make a svn ignore global list (in git is .gitignore) and put the name of the autogenerated files in order to not commit them into your rep. In rosbuild are:
cmake_install.cmake
CMakeLists.txt.user
CMakeCache.txt
CMakeFiles/
build/
bin/
msg_gen/
srv_gen/
.DS_Store
.cproject
.project
.pydevproject
*~