Problems Building ROS Hydro for Debian

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The catkin package is giving me all kinds of problems. I have been having problems recently with Import and PYTHONPATH. After adding every catkin_pkg folder I could find to that, this latest block says that --install-layout is not recognized.

==> make -j2 -l2 in '/home/cbt33/Modules/ros_catkin_ws/build_isolated/catkin'
    ==> make install in '/home/cbt33/Modules/ros_catkin_ws/build_isolated/catkin'
    Install the project...
    -- Install configuration: "Release"
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/_setup_util.py
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/env.sh
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/setup.bash
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/setup.sh
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/setup.zsh
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/.rosinstall
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/etc/catkin/profile.d/05.catkin_make.bash
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/etc/catkin/profile.d/05.catkin_make_isolated.bash
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/lib/pkgconfig/catkin.pc
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkinConfig.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkinConfig-version.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/package.xml
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/LICENSE
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/eigen/cmake/eigen-config.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/eigen/cmake/eigen-config-version.cmake
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/string_starts_with.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/list_append_unique.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkin_python_setup.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/all.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/atomic_configure_file.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/assert.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkin_add_env_hooks.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/python.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/list_append_deduplicate.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/shell.cmake
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/env-hooks
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/env-hooks/05.catkin_make_isolated.bash
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/env-hooks/05.catkin-test-results.sh.develspace.in
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/env-hooks/05.catkin_make.bash
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/env-hooks/05.catkin-test-results.bat.develspace.in
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/interrogate_setup_dot_py.py
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/em
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/em/pkg.pc.em
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/em/order_packages.cmake.em
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkin_generate_environment.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkin_install_python.cmake
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/catkin_workspace.cmake
    -- Installing: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/templates
    -- Up-to-date: /home/cbt33/Modules/ros_catkin_ws/install_isolated/share/catkin/cmake/templates/Doxyfile.in
    -- Up-to-date: /home/cbt33 ...