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Manually creating each file and pointing to them using file:// and their path instead of the web URL as tfoote suggested has solved this problem but hasn't improved my situation much.
If you just open the raw github link that it returns in your error code (i.e. //raw.github.com/ros/rosdistro/master/rosdep/sources.list.d/20-default.list) and copy its contents into a file called 20-default.list in /etc/ros/rosdep/sources.list.d/ then you should be able to skip the rosdep init step and proceed to rosdep update.
As you'll see after this you will have to indivdually do this for each link inside 20-default.list so I'm still stuck but slowly working through my problems. Hopefully this helps you and thank tfoote for suggesting the fix. If I manage to figure out anything else I'll let you know
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