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catkin_make is a fairly thin layer over cmake/make invocations. This means the above command is simply invoking make install on the cmake generated Makefiles. The install prefix is the one for the catkin_make/cmake invocation that generated these make files. If you built your project with catkin_make build ... before and then invoke your command above, cmake will not be rerun to regenerate the files (catkin does not currently keep track of which arguments you passed previously).
In short, the following invocation should probably do the right thing:
catkin_make -DCMAKE_INSTALL_PREFIX=/opt/ros/groovy install --force-cmake
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