Linking errors after updating to Hydro [closed]

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I updated my ROS distribution to Hydro from Fuerte today and followed the migration guide to update my codes(mostly related to PCL). But building it gives much linking error after compiling:

In function `message_filters::Synchronizer<message_filters::sync_policies::exacttime<sensor_msgs::pointcloud2_<std::allocator<void> >, sensor_msgs::Image_<std::allocator<void> >, message_filters::NullType, message_filters::NullType, message_filters::NullType, message_filters::NullType, message_filters::NullType, message_filters::NullType, message_filters::NullType> >::disconnectAll()':
/opt/ros/hydro/include/message_filters/synchronizer.h:351: undefined reference to `message_filters::Connection::disconnect()'
...
In function `void pcl::detail::FieldMapper<pcl::pointxyzrgb>::operator()<pcl::fields::rgb>()':
/usr/include/pcl-1.7/pcl/conversions.h:106: undefined reference to `pcl::console::print(pcl::console::VERBOSITY_LEVEL, char const*, ...)'
...
In function `Duration':
/opt/ros/hydro/include/ros/duration.h:119: undefined reference to `tf::Transformer::DEFAULT_CACHE_TIME'
undefined reference to `tf::Transformer::waitForTransform(std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, ros::Time const&, std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, ros::Time const&, std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, ros::Duration const&, ros::Duration const&, std::basic_string<char, std::char_traits<char="">, std::allocator<char> >*) const'
undefined reference to `tf::Transformer::lookupTransform(std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, ros::Time const&, std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, ros::Time const&, std::basic_string<char, std::char_traits<char="">, std::allocator<char> > const&, tf::StampedTransform&) const'

This was an rosbuild managed project and it works well on ROS Fuerte. I was managing the projects through env var $ROS_PACKAGE. This package depends on std_msgs, roscpp, sensor_msgs...tf...pcl_conversions in the manifest.xml, and it uses OpenCV, Qt4, PCL and many other 3rd party system dependencies in CMakeLists.txt .

So what am I missing? Should more dependencies be added into the manifest.xml?