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Before a compiling pcl, the FLANN package needs to be installed from sources via
git clone https://github.com/wg-debs/flann.git
make & make install
To install PCL, the solution was to explicitely take the sources from the wg-debs archive via cloning the GIT repository
git clone https://github.com/wg-debs/pcl.git
To get the package working, i had to switch some build parts on or off with the command
cmake ../ -DUSE_ROS=ON -DBUILD_TESTS=OFF -DBUILD_global_tests=OFF
-DBUILD_examples=OFF -DBUILD_visualization=ON
before calling
make -j8 & make install
I also added the libraries libgtest-dev and libvtk5-dev to the yaml File i created (for the dependencies).