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Trying this locally seems to succeed for me:

wget -O /tmp/base.yaml https://raw.githubusercontent.com/ros/rosdistro/master/rosdep/base.yaml
python -c 'import yaml; yaml.load("/tmp/base.yaml")'

The file itself looks alright.

Github is (in)famous for suffering from transient problems and issues with downloading files from it.

Could you "just try again"?

Trying this locally seems to succeed for me:

rosdep update

And just to make sure:

wget -O /tmp/base.yaml https://raw.githubusercontent.com/ros/rosdistro/master/rosdep/base.yaml
python -c 'import yaml; yaml.load("/tmp/base.yaml")'

The file itself also looks alright.

Github is (in)famous for suffering from transient problems and issues with downloading files from it.

Could you "just try again"?