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You can remove rosdep by calling sudo apt-get remove python-rosdep however if you're looking to clean up disk space that's not what you want. Rosdep's size is well under 1 MB.

What you're probably seeing is the dependencies that you asked rosdep to install for you. They will need to be uninstalled just like any other package you installed. To get a list of what rosdep installed for a workspace use the --reinstall --simulate options and reinvoke rosdep install like you did before.

Note that when you uninstall these dependencies anything that relies on them will no longer work.