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Listing /opt/ros/indigo/include should be sufficient to get the system installed ROS packages (see the Kinetic line my config: https://gist.github.com/dirk-thomas/45a47f4de7f2e6d6f18d#file-settings-json-L224).
Additionally you want the include folders from your workspace(s). Depending on how you build your workspace(s) that might become more effort. If you always install into a single location (merged install space). you just add that one too: e.g. ~/ws/install/include. If you install into package specific paths you will need to enumerate them all, e.g.:
~/ws/install/pkgA/include~/ws/install/pkgB/includeAnd in the case you don't install at all you will have to specify potentially two paths for each package: one pointing to the include folder in the source space and another pointing to the include folder in the devel space.
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