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I tested the code and it works as it is.

Later I found out, that the string compliant with ISO-8601 can represent time with various precision.

Anyway the output I got from the ROS timestamp using the function:

boost::posix_time::to_iso_extended_string(my_posix_time)

looked like this:

iso_time_str = 2017-01-17T21:02:40.289279

I needed only seconds so I am happy with the result. Thank you for quick answer.