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Hello! I have found the reason:

@ama wrote: "My proxies are correct."

My problem appeared after proxy setup, so I was looking into the problem.

In my environment I had "https_proxy" and "HTTPS_PROXY" declared with an empty string. All the tools, apt, wget, curl works fine with this, but rosdep init AND rosdep update fails (version 0.11.4 here)

So you just have to unset these, and voila...