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I have succeeded, the message files (the parsed header files) are in /opt/ros/indigo/include/mavros/ thus the include headers needed to be #include <mavros/RCIn.h> instead of#include <mavros_msgs rcin.h="">and therefore it failed. Mypackage.xmlandCMakeLists.txtonly contain themavros` packages. I got the application compiling. I am facing other issues right now, but those out of the scope of this question.

Thanks for your help guys!

I have succeeded, the message files (the parsed header files) are in /opt/ros/indigo/include/mavros/ thus the include headers needed to be #include <mavros/RCIn.h> <mavros/RCIn.h> instead ofof #include <mavros_msgs/RCIn.h>#include <mavros_msgs rcin.h=""> and therefore it failed. MyMy package.xmlpackage.xml and andCMakeLists.txtCMakeLists.txt only contain thethe mavrosmavros` packages. I got the application compiling. I am facing other issues right now, but those out of the scope of this question.

Thanks for your help guys!