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I have an opened a support email with github and they are looking into it, but I too think it is related to the roll out of their new CDN. It is safe to ignore this error for now, the file it is failing to retrieve is empty and vestigial anyways.

In fact you can get rid of it by re-initilaizing rosdep:

  • Run rosdep init, it will fail because it's already initialized
  • Follow the instructions it gives you to remove the config files
  • Run rosdep init again
  • Run rosdep update (hoepfully without error)