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Thanks for the bug report. I was missing a step in the installation instructions: you have to first 'cd skeleton_markers' before doing 'git checkout hydro-devel'. Here are the corrected instructions and I have also updated the ROS Wiki page:

$ cd ~/catkin_ws/src (change to match your catkin workspace directory)
$ git clone
$ cd skeleton_markers
$ git checkout hydro-devel
$ cd ~/catkin_ws
$ catkin_make